
NCBI . NLM . NIH . GOV {
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Title[redir]:
Short blocks from the noncoding parts of the human genome have instances within nearly all known genes and relate to biological processes - PMC
Description:
Using an unsupervised pattern-discovery method, we processed the human intergenic and intronic regions and catalogued all variable-length patterns with identically conserved copies and multiplicities above what is expected by chance. Among the ...
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Keywords {🔍}
pyknons, doi, human, utrs, regions, instances, google, scholar, pubmed, genes, genome, nucleotides, patterns, pyknon, supporting, pmc, intergenic, intronic, copies, text, crs, utr, article, genomes, putr, science, discovered, processes, coding, number, free, conserved, positions, specific, motifs, elements, mouse, nature, information, intergenicintronic, reverse, analysis, biological, rna, pattern, shown, table, res, found, transcripts,
Topics {✒️}
straightforward arm–loop–arm architecture hairpin-shaped rna structure straightforward sense–antisense relationship �pack-mule” paradigm revealed form hairpin-shaped structures rnai-mediated dsrna breakdown predicted hairpin-shaped structures pmc beta search sought variable-length motifs posttranscriptional gene silencing cross-genome comparisons reveal results pattern-discovery step supplementary materials included repeat-free regions larger-size conserved unit transcribed gene-related sequences pyknon-based regulatory layer length-maximal patterns satisfying unsupervised pattern-discovery method pattern sets p5′utr pnas web site identify functional elements amino acid coding cross-species comparisons cel p5′utr/5′utr untranslated/cr instances collided statistically significant manner [google scholar] 38 [google scholar] 41 full list appears immediately surrounding neighborhoods amino acid regions obtained similar results small rna molecules dsrna-breakdown products human intergenic/intronic regions recent work suggested comparative analyses permitted phylogenetically distant worm achieve evolutionary novelty gene-coding parts blastn-based scheme crick-strand instances 8-mer motif agrees inside repeat elements intergenic/intronic positions covered form double-stranded license information pmcid sequence-based analysis variable-length patterns
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