
CRAN . RSTUDIO . COM {
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Title:
CRAN: Package scellpam
Description:
PAM (Partitioning Around Medoids) algorithm application to samples of single cell sequencing techniques with a high number of cells (as many as the computer memory allows). The package uses a binary format to store matrices (either full, sparse or symmetric) in files written in the disk that can contain any data type (not just double) which allows its manipulation when memory is sufficient to load them as int or float, but not as double. The PAM implementation is done in parallel, using several/all the cores of the machine, if it has them. This package shares a great part of its code with packages
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Keywords {🔍}
scellpam, scellpamtgz, package, gpl, scellpamzip, rrelease, roldrel, partitioning, medoids, single, cell, data, high, number, cells, pam, memory, double, rcpp, doi, juan, domingo, citation, binaries, arm, applying, algorithm, application, samples, sequencing, techniques, computer, binary, format, store, matrices, full, sparse, symmetric, files, written, disk, type, manipulation, sufficient, load, int, float, implementation, parallel,
Topics {✒️}
single cell data gz windows binaries canonical form https scellpam results documentation scellpam archive linking news cran checks zip macos binaries org/package=scellpam scellpam author data type high number algorithm application binary format store matrices files written pam implementation great part packages 'jmatrix' splatter published spanish ministry reference manual pdf vignettes r-devel r-release r-oldrel r-project package shares package source applying partitioning cells pam computer memory rcpp suggests gpl-3 [expanded scellpam citation domingo 2024-07-18 doi package 32614/cran zip //cran partitioning cells memory rcpp gpl-2 gpl medoids samples full
External Links {🔗}(7)
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