CRAN . RSTUDIO . COM {
}
Title:
CRAN: Package rliger
Description:
Uses an extension of nonnegative matrix factorization to identify shared and dataset-specific factors. See Welch J, Kozareva V, et al (2019) <<a href="https://doi.org/10.1016%2Fj.cell.2019.05.006" target="_top">doi:10.1016/j.cell.2019.05.006</a>>, and Liu J, Gao C, Sodicoff J, et al (2020) <<a href="https://doi.org/10.1038%2Fs41596-020-0391-8" target="_top">doi:10.1038/s41596-020-0391-8</a>> for more details.
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Keywords {🔍}
aut, ctb, rligertgz, rliger, rligerzip, rrelease, roldrel, matrix, welch, kozareva, liu, gao, sodicoff, rcpp, suggests, joshua, yichen, wang, source, binaries, arm, reverse, linked, inference, genomic, experimental, relationships, extension, nonnegative, factorization, identify, shared, datasetspecific, factors, doijcell, dois, details, version, depends, methods, stats, utils, imports, cli, delayedarray, dplyr, ggplot, grid, hdfarray, hdfr,
Topics {✒️}
/welch-lab/liger/issues license readme news cran checks genomic experimental relationships dataset-specific factors yichen wang [aut evan macosko [aut io/liger/ needscompilation gz windows binaries joshua welch [aut] rliger results documentation paul hoffman [ctb] ilya korsunsky [ctb] robert lee [ctb] nonnegative matrix factorization chao gao [aut] jialin liu [aut] joshua sodicoff [aut velina kozareva [aut zip macos binaries canonical form https org/package=rliger //welch-lab reverse suggests rliger author linked inference identify shared uwot linkingto rcppprogress suggests viridis published gpl-3 url reference manual pdf vignettes data integration r-devel r-release r-oldrel sccustomize linking r-project package source liger welch rliger ctb] kozareva liu gao sodicoff matrix org 32614/cran
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