CRAN . RSTUDIO . COM {
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Title:
CRAN: Package rhierbaps
Description:
Implements the hierarchical Bayesian analysis of populations structure (hierBAPS) algorithm of Cheng et al. (2013) <<a href="https://doi.org/10.1093%2Fmolbev%2Fmst028" target="_top">doi:10.1093/molbev/mst028</a>> for clustering DNA sequences from multiple sequence alignments in FASTA format. The implementation includes improved defaults and plotting capabilities and unlike the original
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Keywords {🔍}
rhierbaps, rhierbapstgz, rhierbapszip, rrelease, roldrel, clustering, sequence, hierbaps, algorithm, version, gerry, tonkinhill, license, citation, binaries, arm, genetic, data, implements, hierarchical, bayesian, analysis, populations, structure, cheng, doimolbevmst, dna, sequences, multiple, alignments, fasta, format, implementation, includes, improved, defaults, plotting, capabilities, unlike, original, matlab, removes, singleton, snps, default, imports, ape, purrr, utils, ggplot,
Topics {✒️}
gerry tonkin-hill [cre /gtonkinhill/rhierbaps/issues license readme news cran checks clustering dna sequences multiple sequence alignments /gtonkinhill/rhierbaps needscompilation hierarchical bayesian analysis gz windows binaries rhierbaps results documentation rhierbaps archive linking zip macos binaries canonical form https org/package=rhierbaps rhierbaps author rhierbaps downloads populations structure fasta format plotting capabilities methods suggests formatr published aut] maintainer reference manual pdf vignettes package source r-devel r-release r-oldrel r-project version rhierbaps citation hierbaps algorithm 32614/cran package //cran https zip cheng al unlike default 4 imports ape purrr utils ggplot2 matrixstats patchwork knitr
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