CRAN . RSTUDIO . COM {
}
Title:
CRAN: Package netgsa
Description:
Carry out network-based gene set analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data. Implements methods described in Shojaie A, Michailidis G (2010) <<a href="https://doi.org/10.1093%2Fbiomet%2Fasq038" target="_top">doi:10.1093/biomet/asq038</a>>, Shojaie A, Michailidis G (2009) <<a href="https://doi.org/10.1089%2Fcmb.2008.0081" target="_top">doi:10.1089/cmb.2008.0081</a>>, and Ma J, Shojaie A, Michailidis G (2016) <<a href="https://doi.org/10.1093%2Fbioinformatics%2Fbtw410" target="_top">doi:10.1093/bioinformatics/btw410</a>>.
Website Age:
27 years and 1 months (reg. 1998-05-15).
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Keywords {🔍}
netgsa, shojaie, aut, michailidis, netgsazip, rrelease, roldrel, netgsatgz, networkbased, gene, set, analysis, interactions, rcpp, michael, hellstern, binaries, arm, carry, incorporating, external, information, genes, learned, data, implements, methods, doibiometasq, doicmb, doibioinformaticsbtw, version, depends, imports, annotationdbi, corpcor, datatable, dplyr, genefilter, graph, graphite, glmnet, glassofast, httr, igraph, magrittr, matrix, msigdbr, orghsegdb, quadprog, rcy,
Topics {✒️}
michael hellstern [aut incorporating external information gz windows binaries jing ma [aut] /mikehellstern/netgsa needscompilation netgsa results documentation netgsa archive linking canonical form https ali shojaie [aut] omics cran checks zip macos binaries org/package=netgsa netgsa author netgsa downloads implements methods rcppeigen suggests rmarkdown published readme news reference manual pdf vignettes package source r-devel r-release r-oldrel r-project interactions learned netgsa ma org package https 32614/cran zip //cran interactions shojaie genes data michailidis 1089/cmb version 5 depends imports annotationdbi corpcor table dplyr genefilter graph graphite
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