CRAN . RSTUDIO . COM {
}
Title:
CRAN: Package dowser
Description:
Provides a set of functions for inferring, visualizing, and analyzing B cell phylogenetic trees. Provides methods to 1) reconstruct unmutated ancestral sequences, 2) build B cell phylogenetic trees using multiple methods, 3) visualize trees with metadata at the tips, 4) reconstruct intermediate sequences, 5) detect biased ancestor-descendant relationships among metadata types Workflow examples available at documentation site (see URL). Citations: Hoehn et al (2022) <<a href="https://doi.org/10.1371%2Fjournal.pcbi.1009885" target="_top">doi:10.1371/journal.pcbi.1009885</a>>, Hoehn et al (2021) <<a href="https://doi.org/10.1101%2F2021.01.06.425648" target="_top">doi:10.1101/2021.01.06.425648</a>>.
Website Age:
27 years and 1 months (reg. 1998-05-15).
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Keywords {🔍}
source, code, trees, dowser, reconstruct, hoehn, dowsertgz, cell, methods, sequences, ctb, dowserzip, rrelease, roldrel, phylogenetic, build, metadata, intermediate, documentation, url, doi, kenneth, aut, citation, lineage, binaries, arm, receptor, phylogenetics, toolkit, set, functions, inferring, visualizing, analyzing, unmutated, ancestral, multiple, visualize, tips, detect, biased, ancestordescendant, relationships, types, workflow, examples, site, citations, doijournalpcbi,
Topics {✒️}
org/kleinstein/dowser/issues license readme news cran checks steven kleinstein [aut reconstruct intermediate sequences cole jensen [ctb] susanna marquez [ctb] reconstruct clonal germlines cell phylogenetic trees discrete trait analysis light chain data gz windows binaries plotting lineage trees dowser archive linking org/package=dowser dowser results documentation kenneth hoehn [aut zip macos binaries canonical form https build lineage trees visualize trees building trees dowser author documentation site utils suggests pwalign published cph] maintainer io needscompilation reference manual pdf vignettes measurable evolution paired heavy r-devel r-release r-oldrel r-project agpl-3 url multiple methods package source dowser //dowser metadata citation build 32614/cran package //cran hoehn https zip url
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