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We are analyzing https://www.nature.com/articles/s41467-019-09974-5.

Title:
A modular degron library for synthetic circuits in mammalian cells | Nature Communications
Description:
Tight control over protein degradation is a fundamental requirement for cells to respond rapidly to various stimuli and adapt to a fluctuating environment. Here we develop a versatile, easy-to-handle library of destabilizing tags (degrons) for the precise regulation of protein expression profiles in mammalian cells by modulating target protein half-lives in a predictable manner. Using the well-established tetracycline gene-regulation system as a model, we show that the dynamics of protein expression can be tuned by fusing appropriate degron tags to gene regulators. Next, we apply this degron library to tune a synthetic pulse-generating circuit in mammalian cells. With this toolbox we establish a set of pulse generators with tailored pulse lengths and magnitudes of protein expression. This methodology will prove useful in the functional roles of essential proteins, fine-tuning of gene-expression systems, and enabling a higher complexity in the design of synthetic biological systems in mammalian cells. One method of controlling protein degradation is through the use of degrons. Here the authors present a toolbox of characterised degrons as a library to fine-tune biological gene-expression systems. Its application is demonstrated by a set of tunable synthetic pulse generators in mammalian cells.
Website Age:
30 years and 10 months (reg. 1994-08-11).

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Keywords {🔍}

article, protein, google, scholar, cells, fig, cas, expression, supplementary, synthetic, cell, degrons, gene, nature, seap, degradation, pulse, ads, library, reporter, data, proteins, xubvr, constructs, nat, mammalian, fluorescence, ubm, degron, human, biol, control, tags, system, fused, tta, dendra, fluorescent, transcription, levels, elements, hek, source, pchx, circuit, design, ubr, ubk, ubd, ubs,

Topics {✒️}

negative-feedback element pttgr1-tag-l7ae-p2a-citrine-pa nature portfolio autoactivating ptre-tag-tta-dendra2-pa construct pttgr1-tag-l7ae-p2a-citrine-pa privacy policy pttgr1-3xubvr-l7ae-p2a-citrine-pa pttgr1-ubm-l7ae-p2a-citrine-pa pttgr1-ubs-l7ae-p2a-citrine-pa pttgr1-ubk-l7ae-p2a-citrine-pa pttgr1-ubr-l7ae-p2a-citrine-pa pttgr1-ubd-l7ae-p2a-citrine-pa glucose-sensitive insulin-secreting beta discussion libraries phcmv-tag-mcp-vpr-dendra2-pa phcmv-tag-tta-dendra2-tag-pa author information authors advertising data availability nature communications phcmv-mcp-vpr-dendra2-pa phcmv-tag-tta-dendra2-pa phcmv-tag-dcas9-dendra2-pa social media phcmv-tag-rtta-dendra2-pa ptre-tag-tta-dendra2-pa phcmv-3xubvr-tta-dendra2-pa /dbox-3xubvr-fast-ft-pa pttgr1-tag-l7ae-pa source data file phcmv-ubm-tta-dendra2-pa time-delay ttgr-vp16 element engineered crispr-cas9 complex 3xubvr-tagged mcp-vpr construct tools n-terminal amino acid reprints phcmv-ubr-tta-dendra2-pa phcmv-ubk-tta-dendra2-pa phcmv-ubd-tta-dendra2-pa phcmv-ubs-tta-dendra2-pa 3xubvr-tagged fast-ft mrna dna-based switchable memories phcmv-tta-dendra2-pa cytokine-specific refractory states analogue information processing rna-binding coat protein negative-feedback element l7ae rna-binding protein l7ae single-axon action potentials rna-mediated transcriptional repressors59

Schema {🗺️}

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         headline:A modular degron library for synthetic circuits in mammalian cells
         description:Tight control over protein degradation is a fundamental requirement for cells to respond rapidly to various stimuli and adapt to a fluctuating environment. Here we develop a versatile, easy-to-handle library of destabilizing tags (degrons) for the precise regulation of protein expression profiles in mammalian cells by modulating target protein half-lives in a predictable manner. Using the well-established tetracycline gene-regulation system as a model, we show that the dynamics of protein expression can be tuned by fusing appropriate degron tags to gene regulators. Next, we apply this degron library to tune a synthetic pulse-generating circuit in mammalian cells. With this toolbox we establish a set of pulse generators with tailored pulse lengths and magnitudes of protein expression. This methodology will prove useful in the functional roles of essential proteins, fine-tuning of gene-expression systems, and enabling a higher complexity in the design of synthetic biological systems in mammalian cells. One method of controlling protein degradation is through the use of degrons. Here the authors present a toolbox of characterised degrons as a library to fine-tune biological gene-expression systems. Its application is demonstrated by a set of tunable synthetic pulse generators in mammalian cells.
         datePublished:2019-05-01T00:00:00Z
         dateModified:2023-01-24T00:00:00Z
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      headline:A modular degron library for synthetic circuits in mammalian cells
      description:Tight control over protein degradation is a fundamental requirement for cells to respond rapidly to various stimuli and adapt to a fluctuating environment. Here we develop a versatile, easy-to-handle library of destabilizing tags (degrons) for the precise regulation of protein expression profiles in mammalian cells by modulating target protein half-lives in a predictable manner. Using the well-established tetracycline gene-regulation system as a model, we show that the dynamics of protein expression can be tuned by fusing appropriate degron tags to gene regulators. Next, we apply this degron library to tune a synthetic pulse-generating circuit in mammalian cells. With this toolbox we establish a set of pulse generators with tailored pulse lengths and magnitudes of protein expression. This methodology will prove useful in the functional roles of essential proteins, fine-tuning of gene-expression systems, and enabling a higher complexity in the design of synthetic biological systems in mammalian cells. One method of controlling protein degradation is through the use of degrons. Here the authors present a toolbox of characterised degrons as a library to fine-tune biological gene-expression systems. Its application is demonstrated by a set of tunable synthetic pulse generators in mammalian cells.
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      name:Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland
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