VARSCAN . SOURCEFORGE . NET {}

Detected CMS Systems:

Adobe Dreamweaver (1 occurrences)

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Matching Content Categories
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Monthly Traffic Estimate
How Does Varscan.sourceforge.net Make Money
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We are analyzing https://varscan.sourceforge.net/somatic-calling.html.

Title:
VarScan - Somatic Mutation Calling
Description:
No description found...
Website Age:
25 years and 10 months (reg. 1999-08-08).

Matching Content Categories {📚}

Telecommunications
Books & Literature
Video & Online Content

Content Management System {📝}

What CMS is varscan.sourceforge.net built with?

Varscan.sourceforge.net is powered by ADOBE DREAMWEAVER.

Traffic Estimate {📈}

What is the average monthly size of varscan.sourceforge.net audience?

🚦 Initial Traffic: less than 1k visitors per month

Based on our best estimate, this website will receive around 119 visitors per month in the current month.
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How Does Varscan.sourceforge.net Make Money? {💸}

We're unsure if the website is profiting.

Not all websites focus on profit; some are designed to educate, connect people, or share useful tools. People create websites for numerous reasons. And this could be one such example. Varscan.sourceforge.net has a secret sauce for making money, but we can't detect it yet.

Keywords {🔍}

samtools, normal, reference, tumor, somatic, pileup, reads, col, varscan, variant, output, file, call, germline, format, command, input, position, strand, calling, normalpileup, tumorpileup, files, consensus, mpileup, positions, sequence, base, mutations, number, supporting, allele, loh, bam, match, calls, indels, java, jar, varscanjar, coverage, validation, normalbam, tumorbam, called, pvalue, referencesupporting, variantsupporting, support, methods,

Topics {✒️}

sam/bam file normal read counts high-confidence somatic mutations low-confidence somatic mutations accommodate multi-sample calling samtools pileup format generate consensus format germline calling subcommands manual javadoc download consensus-calling parameters somatic/loh events tumor_reads1_plus somatic mutations samtools support copy number somatic output file fasta format somatic status call normal reference-supporting reads normal variant-supporting reads tumor reference-supporting reads tumor variant-supporting reads commands variant calling jar somatic normal format raw pileup output calls java -jar varscan jar processsomatic [output varscan variant detection native output field germline events somatic_p_value consensus genotype call samtools consensus information pileup older versions reads supporting reference reads supporting variant samtools software package sites called germline refuting false positives binary alignment/map linux/unix/macosx save disk space simple perl script perl snippet shows tumor matches normal numerous reference sequences aligned reads supporting base immediately upstream inserted base occurs

External Links {🔗}(19)

Analytics and Tracking {📊}

Google Analytics

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