Here's how LINK.SPRINGER.COM makes money* and how much!

*Please read our disclaimer before using our estimates.
Loading...

LINK . SPRINGER . COM {}

  1. Analyzed Page
  2. Matching Content Categories
  3. CMS
  4. Monthly Traffic Estimate
  5. How Does Link.springer.com Make Money
  6. Keywords
  7. Topics
  8. Schema
  9. External Links
  10. Analytics And Tracking
  11. Libraries
  12. CDN Services

We are analyzing https://link.springer.com/article/10.1186/s13059-015-0694-1.

Title:
Comparison of RNA-seq and microarray-based models for clinical endpoint prediction | Genome Biology
Description:
Background Gene expression profiling is being widely applied in cancer research to identify biomarkers for clinical endpoint prediction. Since RNA-seq provides a powerful tool for transcriptome-based applications beyond the limitations of microarrays, we sought to systematically evaluate the performance of RNA-seq-based and microarray-based classifiers in this MAQC-III/SEQC study for clinical endpoint prediction using neuroblastoma as a model. Results We generate gene expression profiles from 498 primary neuroblastomas using both RNA-seq and 44 k microarrays. Characterization of the neuroblastoma transcriptome by RNA-seq reveals that more than 48,000 genes and 200,000 transcripts are being expressed in this malignancy. We also find that RNA-seq provides much more detailed information on specific transcript expression patterns in clinico-genetic neuroblastoma subgroups than microarrays. To systematically compare the power of RNA-seq and microarray-based models in predicting clinical endpoints, we divide the cohort randomly into training and validation sets and develop 360 predictive models on six clinical endpoints of varying predictability. Evaluation of factors potentially affecting model performances reveals that prediction accuracies are most strongly influenced by the nature of the clinical endpoint, whereas technological platforms (RNA-seq vs. microarrays), RNA-seq data analysis pipelines, and feature levels (gene vs. transcript vs. exon-junction level) do not significantly affect performances of the models. Conclusions We demonstrate that RNA-seq outperforms microarrays in determining the transcriptomic characteristics of cancer, while RNA-seq and microarray-based models perform similarly in clinical endpoint prediction. Our findings may be valuable to guide future studies on the development of gene expression-based predictive models and their implementation in clinical practice.
Website Age:
28 years and 1 months (reg. 1997-05-29).

Matching Content Categories {šŸ“š}

  • Education
  • Science
  • Careers

Content Management System {šŸ“}

What CMS is link.springer.com built with?

Custom-built

No common CMS systems were detected on Link.springer.com, and no known web development framework was identified.

Traffic Estimate {šŸ“ˆ}

What is the average monthly size of link.springer.com audience?

🌠 Phenomenal Traffic: 5M - 10M visitors per month


Based on our best estimate, this website will receive around 7,643,078 visitors per month in the current month.

check SE Ranking
check Ahrefs
check Similarweb
check Ubersuggest
check Semrush

How Does Link.springer.com Make Money? {šŸ’ø}

We can't figure out the monetization strategy.

Not all websites focus on profit; some are designed to educate, connect people, or share useful tools. People create websites for numerous reasons. And this could be one such example. Link.springer.com might be making money, but it's not detectable how they're doing it.

Keywords {šŸ”}

models, rnaseq, gene, expression, prediction, clinical, neuroblastoma, pubmed, article, data, google, scholar, genes, additional, file, cas, performances, analysis, endpoint, cancer, microarrays, endpoints, patients, microarray, research, usa, microarraybased, validation, model, university, aceview, fig, degs, features, center, information, profiles, reads, performance, study, transcript, genome, results, predictive, figure, central, expressed, expressionbased, table, based,

Topics {āœ’ļø}

retrospective siopen/cog/gpoh study gov/repository/acedb/software/magic gene expression-based classifiers gene expression profiling fƶrdergesellschaft kinderkrebs-neuroblastom-forschung gene expression-based prediction gene expression-based classification high-throughput shotgun sequencing bldg 38a/room 8s808 danielle thierry-mieg major clinico-genetic subtypes microarray-based expression data rt-qpcr-based assays [6 gene-level analysis failed prognostic multi-gene signature expression profiling technology color gene-expression analyses article download pdf comprehensive cdna-supported gene jean thierry-mieg high-risk patient outcome outperform microarray-based models rna-seq expression data clinico-genetic neuroblastoma subgroups prognostic microrna/mrna signature kaplan-meier survival estimates rna-seq outperforms microarrays rna-seq-based classifiers rna-seq data compares microarray-based predictive models current high-risk patients gene expression analysis rna-seq-based models rna-seq based models rna-seq processing pipelines gene expression profiles internal cross-validation processes rna-seq processing pipeline rna-seq data processing supplementary figures s1–s13 supplementary tables s1–s9 raw rna-seq data gene expression measurements gene expression levels gene expression models transcript-level expression values maqc-iii project utilizing expression-based classifiers complex expression patterns expression profiling

Schema {šŸ—ŗļø}

WebPage:
      mainEntity:
         headline:Comparison of RNA-seq and microarray-based models for clinical endpoint prediction
         description:Gene expression profiling is being widely applied in cancer research to identify biomarkers for clinical endpoint prediction. Since RNA-seq provides a powerful tool for transcriptome-based applications beyond the limitations of microarrays, we sought to systematically evaluate the performance of RNA-seq-based and microarray-based classifiers in this MAQC-III/SEQC study for clinical endpoint prediction using neuroblastoma as a model. We generate gene expression profiles from 498 primary neuroblastomas using both RNA-seq and 44 k microarrays. Characterization of the neuroblastoma transcriptome by RNA-seq reveals that more than 48,000 genes and 200,000 transcripts are being expressed in this malignancy. We also find that RNA-seq provides much more detailed information on specific transcript expression patterns in clinico-genetic neuroblastoma subgroups than microarrays. To systematically compare the power of RNA-seq and microarray-based models in predicting clinical endpoints, we divide the cohort randomly into training and validation sets and develop 360 predictive models on six clinical endpoints of varying predictability. Evaluation of factors potentially affecting model performances reveals that prediction accuracies are most strongly influenced by the nature of the clinical endpoint, whereas technological platforms (RNA-seq vs. microarrays), RNA-seq data analysis pipelines, and feature levels (gene vs. transcript vs. exon-junction level) do not significantly affect performances of the models. We demonstrate that RNA-seq outperforms microarrays in determining the transcriptomic characteristics of cancer, while RNA-seq and microarray-based models perform similarly in clinical endpoint prediction. Our findings may be valuable to guide future studies on the development of gene expression-based predictive models and their implementation in clinical practice.
         datePublished:2015-06-25T00:00:00Z
         dateModified:2015-06-25T00:00:00Z
         pageStart:1
         pageEnd:12
         license:http://creativecommons.org/licenses/by/4.0/
         sameAs:https://doi.org/10.1186/s13059-015-0694-1
         keywords:
            Overall Survival
            Neuroblastoma
            Prediction Performance
            Clinical Endpoint
            Gene Expression Model
            Animal Genetics and Genomics
            Human Genetics
            Plant Genetics and Genomics
            Microbial Genetics and Genomics
            Bioinformatics
            Evolutionary Biology
         image:
            https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig1_HTML.gif
            https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig2_HTML.gif
            https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig3_HTML.gif
            https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig4_HTML.gif
            https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig5_HTML.gif
         isPartOf:
            name:Genome Biology
            issn:
               1465-6906
            volumeNumber:16
            type:
               Periodical
               PublicationVolume
         publisher:
            name:BioMed Central
            logo:
               url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
               type:ImageObject
            type:Organization
         author:
               name:Wenqian Zhang
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Ying Yu
               affiliation:
                     name:Fudan University
                     address:
                        name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Falk Hertwig
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                     address:
                        name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jean Thierry-Mieg
               affiliation:
                     name:NIH/NCBI
                     address:
                        name:NIH/NCBI, Bethesda, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Wenwei Zhang
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Danielle Thierry-Mieg
               affiliation:
                     name:NIH/NCBI
                     address:
                        name:NIH/NCBI, Bethesda, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jian Wang
               affiliation:
                     name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
                     address:
                        name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Cesare Furlanello
               affiliation:
                     name:Fondazione Bruno Kessler (FBK)
                     address:
                        name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Viswanath Devanarayan
               affiliation:
                     name:AbbVie Inc., Global Pharmaceutical R&D
                     address:
                        name:AbbVie Inc., Global Pharmaceutical R&D, Souderton, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jie Cheng
               affiliation:
                     name:GlaxoSmithKline, Discovery Analytics
                     address:
                        name:GlaxoSmithKline, Discovery Analytics, Collegeville, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Youping Deng
               affiliation:
                     name:Rush University Cancer Center
                     address:
                        name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Barbara Hero
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Huixiao Hong
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Meiwen Jia
               affiliation:
                     name:Fudan University
                     address:
                        name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Li Li
               affiliation:
                     name:SAS Institute Inc.
                     address:
                        name:SAS Institute Inc., Cary, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Simon M Lin
               affiliation:
                     name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
                     address:
                        name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Yuri Nikolsky
               affiliation:
                     name:Thomson Reuters IP & Science
                     address:
                        name:Thomson Reuters IP & Science, Carlsbad, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:AndrĆ© Oberthuer
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Tao Qing
               affiliation:
                     name:Fudan University
                     address:
                        name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Zhenqiang Su
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Ruth Volland
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Charles Wang
               affiliation:
                     name:Loma Linda University
                     address:
                        name:Center for Genomics and Division of Microbiology & Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:May D. Wang
               affiliation:
                     name:GeorgiaTech and Emory University
                     address:
                        name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Junmei Ai
               affiliation:
                     name:Rush University Cancer Center
                     address:
                        name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Davide Albanese
               affiliation:
                     name:Fondazione Edmund Mach, CRI-CBC
                     address:
                        name:Fondazione Edmund Mach, CRI-CBC, San Michele all’Adige, Italy
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Shahab Asgharzadeh
               affiliation:
                     name:Children’s Hospital Los Angeles
                     address:
                        name:Children’s Hospital Los Angeles, Los Angeles, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Smadar Avigad
               affiliation:
                     name:Schneider Children’s Medical Center of Israel
                     address:
                        name:Department of Pediatric Hematology-Oncology, Molecular Oncology, Felsenstein Medical Research Center, Schneider Children’s Medical Center of Israel, Petach Tikva, Israel
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Wenjun Bao
               affiliation:
                     name:SAS Institute Inc.
                     address:
                        name:SAS Institute Inc., Cary, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Marina Bessarabova
               affiliation:
                     name:Thomson Reuters IP & Science
                     address:
                        name:Thomson Reuters IP & Science, Carlsbad, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Murray H. Brilliant
               affiliation:
                     name:Marshfield Clinic Research Foundation, Center of Human Genetics
                     address:
                        name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Benedikt Brors
               affiliation:
                     name:German Cancer Research Center (DKFZ)
                     address:
                        name:Department of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Marco Chierici
               affiliation:
                     name:Fondazione Bruno Kessler (FBK)
                     address:
                        name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Tzu-Ming Chu
               affiliation:
                     name:SAS Institute Inc.
                     address:
                        name:SAS Institute Inc., Cary, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jibin Zhang
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Richard G. Grundy
               affiliation:
                     name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham
                     address:
                        name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham, Nottingham, UK
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Min Max He
               affiliation:
                     name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
                     address:
                        name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Scott Hebbring
               affiliation:
                     name:Marshfield Clinic Research Foundation, Center of Human Genetics
                     address:
                        name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Howard L. Kaufman
               affiliation:
                     name:Rush University Cancer Center
                     address:
                        name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Samir Lababidi
               affiliation:
                     name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210
                     address:
                        name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210, Rockville, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Lee J. Lancashire
               affiliation:
                     name:Thomson Reuters IP & Science
                     address:
                        name:Thomson Reuters IP & Science, Carlsbad, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Yan Li
               affiliation:
                     name:Rush University Cancer Center
                     address:
                        name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Xin X. Lu
               affiliation:
                     name:AbbVie Inc., Global Pharmaceutical Research and Development
                     address:
                        name:AbbVie Inc., Global Pharmaceutical Research and Development, North Chicago, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Heng Luo
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
                     name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program
                     address:
                        name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program, Little Rock, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Xiwen Ma
               affiliation:
                     name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center
                     address:
                        name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center, Indianapolis, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Baitang Ning
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Rosa Noguera
               affiliation:
                     name:University of Valencia, Medical School
                     address:
                        name:Department of Pathology, University of Valencia, Medical School, Valencia, Spain
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Martin Peifer
               affiliation:
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                     address:
                        name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                        type:PostalAddress
                     type:Organization
                     name:University of Cologne
                     address:
                        name:Department of Translational Genomics, University of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:John H. Phan
               affiliation:
                     name:GeorgiaTech and Emory University
                     address:
                        name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Frederik Roels
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                     address:
                        name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Carolina Rosswog
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Susan Shao
               affiliation:
                     name:SAS Institute Inc.
                     address:
                        name:SAS Institute Inc., Cary, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jie Shen
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jessica Theissen
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Gian Paolo Tonini
               affiliation:
                     name:University of Padua, Pediatric Research Institute
                     address:
                        name:Neuroblastoma Laboratory, Onco/Hematology Laboratory, SDB Department, University of Padua, Pediatric Research Institute, Padua, Italy
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jo Vandesompele
               affiliation:
                     name:Ghent University, Center for Medical Genetics, Ghent University
                     address:
                        name:Department of Pediatrics and Genetics, Ghent University, Center for Medical Genetics, Ghent University, Ghent, Belgium
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Po-Yen Wu
               affiliation:
                     name:Georgia Institute of Technology, School of Electrical and Computer Engineering
                     address:
                        name:Georgia Institute of Technology, School of Electrical and Computer Engineering, Atlanta, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Wenzhong Xiao
               affiliation:
                     name:Harvard Medical School, Massachusetts General Hospital
                     address:
                        name:Harvard Medical School, Massachusetts General Hospital, Boston, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Joshua Xu
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Weihong Xu
               affiliation:
                     name:Stanford University, Stanford Genome Technology Center
                     address:
                        name:Stanford University, Stanford Genome Technology Center, Palo Alto, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jiekun Xuan
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Yong Yang
               affiliation:
                     name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
                     address:
                        name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Zhan Ye
               affiliation:
                     name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
                     address:
                        name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Zirui Dong
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Ke K. Zhang
               affiliation:
                     name:University of North Dakota School of Medicine
                     address:
                        name:Department of Pathology, University of North Dakota School of Medicine, Grand Forks, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Ye Yin
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Chen Zhao
               affiliation:
                     name:Fudan University
                     address:
                        name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Yuanting Zheng
               affiliation:
                     name:Fudan University
                     address:
                        name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Russell D. Wolfinger
               affiliation:
                     name:SAS Institute Inc.
                     address:
                        name:SAS Institute Inc., Cary, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Tieliu Shi
               affiliation:
                     name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences
                     address:
                        name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences, Shanghai, China
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Linda H. Malkas
               affiliation:
                     name:Beckman Research Institute, City of Hope Comprehensive Cancer Center
                     address:
                        name:Department of Molecular & Cellular Biology, Beckman Research Institute, City of Hope Comprehensive Cancer Center, Duarte, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Frank Berthold
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                     address:
                        name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Jun Wang
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
                     name:University of Copenhagen
                     address:
                        name:Department of Biology, University of Copenhagen, Copenhagen, Denmark
                        type:PostalAddress
                     type:Organization
                     name:King Abdulaziz University
                     address:
                        name:King Abdulaziz University, Jeddah, Saudi Arabia
                        type:PostalAddress
                     type:Organization
                     name:University of Copenhagen
                     address:
                        name:Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Weida Tong
               affiliation:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               type:Person
               name:Leming Shi
               affiliation:
                     name:Fudan University
                     address:
                        name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                        type:PostalAddress
                     type:Organization
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration
                     address:
                        name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                        type:PostalAddress
                     type:Organization
               email:[email protected]
               type:Person
               name:Zhiyu Peng
               affiliation:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                     address:
                        name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                        type:PostalAddress
                     type:Organization
                     name:BGI-Guangzhou, Guangzhou Higher Education Mega Center
                     address:
                        name:BGI-Guangzhou, Guangzhou Higher Education Mega Center, Guangzhou, China
                        type:PostalAddress
                     type:Organization
               email:[email protected]
               type:Person
               name:Matthias Fischer
               affiliation:
                     name:University Children’s Hospital of Cologne
                     address:
                        name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                        type:PostalAddress
                     type:Organization
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                     address:
                        name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                        type:PostalAddress
                     type:Organization
               email:[email protected]
               type:Person
         isAccessibleForFree:1
         type:ScholarlyArticle
      context:https://schema.org
ScholarlyArticle:
      headline:Comparison of RNA-seq and microarray-based models for clinical endpoint prediction
      description:Gene expression profiling is being widely applied in cancer research to identify biomarkers for clinical endpoint prediction. Since RNA-seq provides a powerful tool for transcriptome-based applications beyond the limitations of microarrays, we sought to systematically evaluate the performance of RNA-seq-based and microarray-based classifiers in this MAQC-III/SEQC study for clinical endpoint prediction using neuroblastoma as a model. We generate gene expression profiles from 498 primary neuroblastomas using both RNA-seq and 44 k microarrays. Characterization of the neuroblastoma transcriptome by RNA-seq reveals that more than 48,000 genes and 200,000 transcripts are being expressed in this malignancy. We also find that RNA-seq provides much more detailed information on specific transcript expression patterns in clinico-genetic neuroblastoma subgroups than microarrays. To systematically compare the power of RNA-seq and microarray-based models in predicting clinical endpoints, we divide the cohort randomly into training and validation sets and develop 360 predictive models on six clinical endpoints of varying predictability. Evaluation of factors potentially affecting model performances reveals that prediction accuracies are most strongly influenced by the nature of the clinical endpoint, whereas technological platforms (RNA-seq vs. microarrays), RNA-seq data analysis pipelines, and feature levels (gene vs. transcript vs. exon-junction level) do not significantly affect performances of the models. We demonstrate that RNA-seq outperforms microarrays in determining the transcriptomic characteristics of cancer, while RNA-seq and microarray-based models perform similarly in clinical endpoint prediction. Our findings may be valuable to guide future studies on the development of gene expression-based predictive models and their implementation in clinical practice.
      datePublished:2015-06-25T00:00:00Z
      dateModified:2015-06-25T00:00:00Z
      pageStart:1
      pageEnd:12
      license:http://creativecommons.org/licenses/by/4.0/
      sameAs:https://doi.org/10.1186/s13059-015-0694-1
      keywords:
         Overall Survival
         Neuroblastoma
         Prediction Performance
         Clinical Endpoint
         Gene Expression Model
         Animal Genetics and Genomics
         Human Genetics
         Plant Genetics and Genomics
         Microbial Genetics and Genomics
         Bioinformatics
         Evolutionary Biology
      image:
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig1_HTML.gif
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig2_HTML.gif
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig3_HTML.gif
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig4_HTML.gif
         https://media.springernature.com/lw1200/springer-static/image/art%3A10.1186%2Fs13059-015-0694-1/MediaObjects/13059_2015_694_Fig5_HTML.gif
      isPartOf:
         name:Genome Biology
         issn:
            1465-6906
         volumeNumber:16
         type:
            Periodical
            PublicationVolume
      publisher:
         name:BioMed Central
         logo:
            url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
            type:ImageObject
         type:Organization
      author:
            name:Wenqian Zhang
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Ying Yu
            affiliation:
                  name:Fudan University
                  address:
                     name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Falk Hertwig
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
                  name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                  address:
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jean Thierry-Mieg
            affiliation:
                  name:NIH/NCBI
                  address:
                     name:NIH/NCBI, Bethesda, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Wenwei Zhang
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Danielle Thierry-Mieg
            affiliation:
                  name:NIH/NCBI
                  address:
                     name:NIH/NCBI, Bethesda, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jian Wang
            affiliation:
                  name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
                  address:
                     name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Cesare Furlanello
            affiliation:
                  name:Fondazione Bruno Kessler (FBK)
                  address:
                     name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Viswanath Devanarayan
            affiliation:
                  name:AbbVie Inc., Global Pharmaceutical R&D
                  address:
                     name:AbbVie Inc., Global Pharmaceutical R&D, Souderton, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jie Cheng
            affiliation:
                  name:GlaxoSmithKline, Discovery Analytics
                  address:
                     name:GlaxoSmithKline, Discovery Analytics, Collegeville, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Youping Deng
            affiliation:
                  name:Rush University Cancer Center
                  address:
                     name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Barbara Hero
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Huixiao Hong
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Meiwen Jia
            affiliation:
                  name:Fudan University
                  address:
                     name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Li Li
            affiliation:
                  name:SAS Institute Inc.
                  address:
                     name:SAS Institute Inc., Cary, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Simon M Lin
            affiliation:
                  name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
                  address:
                     name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Yuri Nikolsky
            affiliation:
                  name:Thomson Reuters IP & Science
                  address:
                     name:Thomson Reuters IP & Science, Carlsbad, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:AndrĆ© Oberthuer
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Tao Qing
            affiliation:
                  name:Fudan University
                  address:
                     name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Zhenqiang Su
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Ruth Volland
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Charles Wang
            affiliation:
                  name:Loma Linda University
                  address:
                     name:Center for Genomics and Division of Microbiology & Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:May D. Wang
            affiliation:
                  name:GeorgiaTech and Emory University
                  address:
                     name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Junmei Ai
            affiliation:
                  name:Rush University Cancer Center
                  address:
                     name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Davide Albanese
            affiliation:
                  name:Fondazione Edmund Mach, CRI-CBC
                  address:
                     name:Fondazione Edmund Mach, CRI-CBC, San Michele all’Adige, Italy
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Shahab Asgharzadeh
            affiliation:
                  name:Children’s Hospital Los Angeles
                  address:
                     name:Children’s Hospital Los Angeles, Los Angeles, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Smadar Avigad
            affiliation:
                  name:Schneider Children’s Medical Center of Israel
                  address:
                     name:Department of Pediatric Hematology-Oncology, Molecular Oncology, Felsenstein Medical Research Center, Schneider Children’s Medical Center of Israel, Petach Tikva, Israel
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Wenjun Bao
            affiliation:
                  name:SAS Institute Inc.
                  address:
                     name:SAS Institute Inc., Cary, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Marina Bessarabova
            affiliation:
                  name:Thomson Reuters IP & Science
                  address:
                     name:Thomson Reuters IP & Science, Carlsbad, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Murray H. Brilliant
            affiliation:
                  name:Marshfield Clinic Research Foundation, Center of Human Genetics
                  address:
                     name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Benedikt Brors
            affiliation:
                  name:German Cancer Research Center (DKFZ)
                  address:
                     name:Department of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Marco Chierici
            affiliation:
                  name:Fondazione Bruno Kessler (FBK)
                  address:
                     name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Tzu-Ming Chu
            affiliation:
                  name:SAS Institute Inc.
                  address:
                     name:SAS Institute Inc., Cary, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jibin Zhang
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Richard G. Grundy
            affiliation:
                  name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham
                  address:
                     name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham, Nottingham, UK
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Min Max He
            affiliation:
                  name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
                  address:
                     name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Scott Hebbring
            affiliation:
                  name:Marshfield Clinic Research Foundation, Center of Human Genetics
                  address:
                     name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Howard L. Kaufman
            affiliation:
                  name:Rush University Cancer Center
                  address:
                     name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Samir Lababidi
            affiliation:
                  name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210
                  address:
                     name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210, Rockville, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Lee J. Lancashire
            affiliation:
                  name:Thomson Reuters IP & Science
                  address:
                     name:Thomson Reuters IP & Science, Carlsbad, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Yan Li
            affiliation:
                  name:Rush University Cancer Center
                  address:
                     name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Xin X. Lu
            affiliation:
                  name:AbbVie Inc., Global Pharmaceutical Research and Development
                  address:
                     name:AbbVie Inc., Global Pharmaceutical Research and Development, North Chicago, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Heng Luo
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
                  name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program
                  address:
                     name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program, Little Rock, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Xiwen Ma
            affiliation:
                  name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center
                  address:
                     name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center, Indianapolis, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Baitang Ning
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Rosa Noguera
            affiliation:
                  name:University of Valencia, Medical School
                  address:
                     name:Department of Pathology, University of Valencia, Medical School, Valencia, Spain
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Martin Peifer
            affiliation:
                  name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                  address:
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                     type:PostalAddress
                  type:Organization
                  name:University of Cologne
                  address:
                     name:Department of Translational Genomics, University of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:John H. Phan
            affiliation:
                  name:GeorgiaTech and Emory University
                  address:
                     name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Frederik Roels
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
                  name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                  address:
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Carolina Rosswog
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Susan Shao
            affiliation:
                  name:SAS Institute Inc.
                  address:
                     name:SAS Institute Inc., Cary, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jie Shen
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jessica Theissen
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Gian Paolo Tonini
            affiliation:
                  name:University of Padua, Pediatric Research Institute
                  address:
                     name:Neuroblastoma Laboratory, Onco/Hematology Laboratory, SDB Department, University of Padua, Pediatric Research Institute, Padua, Italy
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jo Vandesompele
            affiliation:
                  name:Ghent University, Center for Medical Genetics, Ghent University
                  address:
                     name:Department of Pediatrics and Genetics, Ghent University, Center for Medical Genetics, Ghent University, Ghent, Belgium
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Po-Yen Wu
            affiliation:
                  name:Georgia Institute of Technology, School of Electrical and Computer Engineering
                  address:
                     name:Georgia Institute of Technology, School of Electrical and Computer Engineering, Atlanta, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Wenzhong Xiao
            affiliation:
                  name:Harvard Medical School, Massachusetts General Hospital
                  address:
                     name:Harvard Medical School, Massachusetts General Hospital, Boston, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Joshua Xu
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Weihong Xu
            affiliation:
                  name:Stanford University, Stanford Genome Technology Center
                  address:
                     name:Stanford University, Stanford Genome Technology Center, Palo Alto, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jiekun Xuan
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Yong Yang
            affiliation:
                  name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
                  address:
                     name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Zhan Ye
            affiliation:
                  name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
                  address:
                     name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Zirui Dong
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Ke K. Zhang
            affiliation:
                  name:University of North Dakota School of Medicine
                  address:
                     name:Department of Pathology, University of North Dakota School of Medicine, Grand Forks, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Ye Yin
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Chen Zhao
            affiliation:
                  name:Fudan University
                  address:
                     name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Yuanting Zheng
            affiliation:
                  name:Fudan University
                  address:
                     name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Russell D. Wolfinger
            affiliation:
                  name:SAS Institute Inc.
                  address:
                     name:SAS Institute Inc., Cary, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Tieliu Shi
            affiliation:
                  name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences
                  address:
                     name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences, Shanghai, China
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Linda H. Malkas
            affiliation:
                  name:Beckman Research Institute, City of Hope Comprehensive Cancer Center
                  address:
                     name:Department of Molecular & Cellular Biology, Beckman Research Institute, City of Hope Comprehensive Cancer Center, Duarte, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Frank Berthold
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
                  name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                  address:
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Jun Wang
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
                  name:University of Copenhagen
                  address:
                     name:Department of Biology, University of Copenhagen, Copenhagen, Denmark
                     type:PostalAddress
                  type:Organization
                  name:King Abdulaziz University
                  address:
                     name:King Abdulaziz University, Jeddah, Saudi Arabia
                     type:PostalAddress
                  type:Organization
                  name:University of Copenhagen
                  address:
                     name:Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Weida Tong
            affiliation:
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Leming Shi
            affiliation:
                  name:Fudan University
                  address:
                     name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
                     type:PostalAddress
                  type:Organization
                  name:National Center for Toxicological Research, U.S. Food and Drug Administration
                  address:
                     name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
                     type:PostalAddress
                  type:Organization
            email:[email protected]
            type:Person
            name:Zhiyu Peng
            affiliation:
                  name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
                  address:
                     name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
                     type:PostalAddress
                  type:Organization
                  name:BGI-Guangzhou, Guangzhou Higher Education Mega Center
                  address:
                     name:BGI-Guangzhou, Guangzhou Higher Education Mega Center, Guangzhou, China
                     type:PostalAddress
                  type:Organization
            email:[email protected]
            type:Person
            name:Matthias Fischer
            affiliation:
                  name:University Children’s Hospital of Cologne
                  address:
                     name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
                     type:PostalAddress
                  type:Organization
                  name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
                  address:
                     name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
                     type:PostalAddress
                  type:Organization
            email:[email protected]
            type:Person
      isAccessibleForFree:1
["Periodical","PublicationVolume"]:
      name:Genome Biology
      issn:
         1465-6906
      volumeNumber:16
Organization:
      name:BioMed Central
      logo:
         url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
         type:ImageObject
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:Fudan University
      address:
         name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
      address:
         name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
         type:PostalAddress
      name:NIH/NCBI
      address:
         name:NIH/NCBI, Bethesda, USA
         type:PostalAddress
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:NIH/NCBI
      address:
         name:NIH/NCBI, Bethesda, USA
         type:PostalAddress
      name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
      address:
         name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
         type:PostalAddress
      name:Fondazione Bruno Kessler (FBK)
      address:
         name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
         type:PostalAddress
      name:AbbVie Inc., Global Pharmaceutical R&D
      address:
         name:AbbVie Inc., Global Pharmaceutical R&D, Souderton, USA
         type:PostalAddress
      name:GlaxoSmithKline, Discovery Analytics
      address:
         name:GlaxoSmithKline, Discovery Analytics, Collegeville, USA
         type:PostalAddress
      name:Rush University Cancer Center
      address:
         name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:Fudan University
      address:
         name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
         type:PostalAddress
      name:SAS Institute Inc.
      address:
         name:SAS Institute Inc., Cary, USA
         type:PostalAddress
      name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
      address:
         name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
         type:PostalAddress
      name:Thomson Reuters IP & Science
      address:
         name:Thomson Reuters IP & Science, Carlsbad, USA
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:Fudan University
      address:
         name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:Loma Linda University
      address:
         name:Center for Genomics and Division of Microbiology & Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, USA
         type:PostalAddress
      name:GeorgiaTech and Emory University
      address:
         name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
         type:PostalAddress
      name:Rush University Cancer Center
      address:
         name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
         type:PostalAddress
      name:Fondazione Edmund Mach, CRI-CBC
      address:
         name:Fondazione Edmund Mach, CRI-CBC, San Michele all’Adige, Italy
         type:PostalAddress
      name:Children’s Hospital Los Angeles
      address:
         name:Children’s Hospital Los Angeles, Los Angeles, USA
         type:PostalAddress
      name:Schneider Children’s Medical Center of Israel
      address:
         name:Department of Pediatric Hematology-Oncology, Molecular Oncology, Felsenstein Medical Research Center, Schneider Children’s Medical Center of Israel, Petach Tikva, Israel
         type:PostalAddress
      name:SAS Institute Inc.
      address:
         name:SAS Institute Inc., Cary, USA
         type:PostalAddress
      name:Thomson Reuters IP & Science
      address:
         name:Thomson Reuters IP & Science, Carlsbad, USA
         type:PostalAddress
      name:Marshfield Clinic Research Foundation, Center of Human Genetics
      address:
         name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
         type:PostalAddress
      name:German Cancer Research Center (DKFZ)
      address:
         name:Department of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany
         type:PostalAddress
      name:Fondazione Bruno Kessler (FBK)
      address:
         name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
         type:PostalAddress
      name:SAS Institute Inc.
      address:
         name:SAS Institute Inc., Cary, USA
         type:PostalAddress
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham
      address:
         name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham, Nottingham, UK
         type:PostalAddress
      name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
      address:
         name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
         type:PostalAddress
      name:Marshfield Clinic Research Foundation, Center of Human Genetics
      address:
         name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
         type:PostalAddress
      name:Rush University Cancer Center
      address:
         name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
         type:PostalAddress
      name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210
      address:
         name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210, Rockville, USA
         type:PostalAddress
      name:Thomson Reuters IP & Science
      address:
         name:Thomson Reuters IP & Science, Carlsbad, USA
         type:PostalAddress
      name:Rush University Cancer Center
      address:
         name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
         type:PostalAddress
      name:AbbVie Inc., Global Pharmaceutical Research and Development
      address:
         name:AbbVie Inc., Global Pharmaceutical Research and Development, North Chicago, USA
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program
      address:
         name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program, Little Rock, USA
         type:PostalAddress
      name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center
      address:
         name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center, Indianapolis, USA
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:University of Valencia, Medical School
      address:
         name:Department of Pathology, University of Valencia, Medical School, Valencia, Spain
         type:PostalAddress
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
      address:
         name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
         type:PostalAddress
      name:University of Cologne
      address:
         name:Department of Translational Genomics, University of Cologne, Cologne, Germany
         type:PostalAddress
      name:GeorgiaTech and Emory University
      address:
         name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
      address:
         name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:SAS Institute Inc.
      address:
         name:SAS Institute Inc., Cary, USA
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:University of Padua, Pediatric Research Institute
      address:
         name:Neuroblastoma Laboratory, Onco/Hematology Laboratory, SDB Department, University of Padua, Pediatric Research Institute, Padua, Italy
         type:PostalAddress
      name:Ghent University, Center for Medical Genetics, Ghent University
      address:
         name:Department of Pediatrics and Genetics, Ghent University, Center for Medical Genetics, Ghent University, Ghent, Belgium
         type:PostalAddress
      name:Georgia Institute of Technology, School of Electrical and Computer Engineering
      address:
         name:Georgia Institute of Technology, School of Electrical and Computer Engineering, Atlanta, USA
         type:PostalAddress
      name:Harvard Medical School, Massachusetts General Hospital
      address:
         name:Harvard Medical School, Massachusetts General Hospital, Boston, USA
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:Stanford University, Stanford Genome Technology Center
      address:
         name:Stanford University, Stanford Genome Technology Center, Palo Alto, USA
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
      address:
         name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
         type:PostalAddress
      name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
      address:
         name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
         type:PostalAddress
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:University of North Dakota School of Medicine
      address:
         name:Department of Pathology, University of North Dakota School of Medicine, Grand Forks, USA
         type:PostalAddress
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:Fudan University
      address:
         name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
         type:PostalAddress
      name:Fudan University
      address:
         name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
         type:PostalAddress
      name:SAS Institute Inc.
      address:
         name:SAS Institute Inc., Cary, USA
         type:PostalAddress
      name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences
      address:
         name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences, Shanghai, China
         type:PostalAddress
      name:Beckman Research Institute, City of Hope Comprehensive Cancer Center
      address:
         name:Department of Molecular & Cellular Biology, Beckman Research Institute, City of Hope Comprehensive Cancer Center, Duarte, USA
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
      address:
         name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
         type:PostalAddress
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:University of Copenhagen
      address:
         name:Department of Biology, University of Copenhagen, Copenhagen, Denmark
         type:PostalAddress
      name:King Abdulaziz University
      address:
         name:King Abdulaziz University, Jeddah, Saudi Arabia
         type:PostalAddress
      name:University of Copenhagen
      address:
         name:Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:Fudan University
      address:
         name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
         type:PostalAddress
      name:National Center for Toxicological Research, U.S. Food and Drug Administration
      address:
         name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
         type:PostalAddress
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
      address:
         name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
         type:PostalAddress
      name:BGI-Guangzhou, Guangzhou Higher Education Mega Center
      address:
         name:BGI-Guangzhou, Guangzhou Higher Education Mega Center, Guangzhou, China
         type:PostalAddress
      name:University Children’s Hospital of Cologne
      address:
         name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
         type:PostalAddress
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
      address:
         name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
         type:PostalAddress
ImageObject:
      url:https://www.springernature.com/app-sn/public/images/logo-springernature.png
Person:
      name:Wenqian Zhang
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
      name:Ying Yu
      affiliation:
            name:Fudan University
            address:
               name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Falk Hertwig
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
            name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
            address:
               name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Jean Thierry-Mieg
      affiliation:
            name:NIH/NCBI
            address:
               name:NIH/NCBI, Bethesda, USA
               type:PostalAddress
            type:Organization
      name:Wenwei Zhang
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
      name:Danielle Thierry-Mieg
      affiliation:
            name:NIH/NCBI
            address:
               name:NIH/NCBI, Bethesda, USA
               type:PostalAddress
            type:Organization
      name:Jian Wang
      affiliation:
            name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
            address:
               name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
               type:PostalAddress
            type:Organization
      name:Cesare Furlanello
      affiliation:
            name:Fondazione Bruno Kessler (FBK)
            address:
               name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
               type:PostalAddress
            type:Organization
      name:Viswanath Devanarayan
      affiliation:
            name:AbbVie Inc., Global Pharmaceutical R&D
            address:
               name:AbbVie Inc., Global Pharmaceutical R&D, Souderton, USA
               type:PostalAddress
            type:Organization
      name:Jie Cheng
      affiliation:
            name:GlaxoSmithKline, Discovery Analytics
            address:
               name:GlaxoSmithKline, Discovery Analytics, Collegeville, USA
               type:PostalAddress
            type:Organization
      name:Youping Deng
      affiliation:
            name:Rush University Cancer Center
            address:
               name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
               type:PostalAddress
            type:Organization
      name:Barbara Hero
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Huixiao Hong
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Meiwen Jia
      affiliation:
            name:Fudan University
            address:
               name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Li Li
      affiliation:
            name:SAS Institute Inc.
            address:
               name:SAS Institute Inc., Cary, USA
               type:PostalAddress
            type:Organization
      name:Simon M Lin
      affiliation:
            name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
            address:
               name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
               type:PostalAddress
            type:Organization
      name:Yuri Nikolsky
      affiliation:
            name:Thomson Reuters IP & Science
            address:
               name:Thomson Reuters IP & Science, Carlsbad, USA
               type:PostalAddress
            type:Organization
      name:AndrĆ© Oberthuer
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Tao Qing
      affiliation:
            name:Fudan University
            address:
               name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Zhenqiang Su
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Ruth Volland
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Charles Wang
      affiliation:
            name:Loma Linda University
            address:
               name:Center for Genomics and Division of Microbiology & Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, USA
               type:PostalAddress
            type:Organization
      name:May D. Wang
      affiliation:
            name:GeorgiaTech and Emory University
            address:
               name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
               type:PostalAddress
            type:Organization
      name:Junmei Ai
      affiliation:
            name:Rush University Cancer Center
            address:
               name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
               type:PostalAddress
            type:Organization
      name:Davide Albanese
      affiliation:
            name:Fondazione Edmund Mach, CRI-CBC
            address:
               name:Fondazione Edmund Mach, CRI-CBC, San Michele all’Adige, Italy
               type:PostalAddress
            type:Organization
      name:Shahab Asgharzadeh
      affiliation:
            name:Children’s Hospital Los Angeles
            address:
               name:Children’s Hospital Los Angeles, Los Angeles, USA
               type:PostalAddress
            type:Organization
      name:Smadar Avigad
      affiliation:
            name:Schneider Children’s Medical Center of Israel
            address:
               name:Department of Pediatric Hematology-Oncology, Molecular Oncology, Felsenstein Medical Research Center, Schneider Children’s Medical Center of Israel, Petach Tikva, Israel
               type:PostalAddress
            type:Organization
      name:Wenjun Bao
      affiliation:
            name:SAS Institute Inc.
            address:
               name:SAS Institute Inc., Cary, USA
               type:PostalAddress
            type:Organization
      name:Marina Bessarabova
      affiliation:
            name:Thomson Reuters IP & Science
            address:
               name:Thomson Reuters IP & Science, Carlsbad, USA
               type:PostalAddress
            type:Organization
      name:Murray H. Brilliant
      affiliation:
            name:Marshfield Clinic Research Foundation, Center of Human Genetics
            address:
               name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
               type:PostalAddress
            type:Organization
      name:Benedikt Brors
      affiliation:
            name:German Cancer Research Center (DKFZ)
            address:
               name:Department of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany
               type:PostalAddress
            type:Organization
      name:Marco Chierici
      affiliation:
            name:Fondazione Bruno Kessler (FBK)
            address:
               name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
               type:PostalAddress
            type:Organization
      name:Tzu-Ming Chu
      affiliation:
            name:SAS Institute Inc.
            address:
               name:SAS Institute Inc., Cary, USA
               type:PostalAddress
            type:Organization
      name:Jibin Zhang
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
      name:Richard G. Grundy
      affiliation:
            name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham
            address:
               name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham, Nottingham, UK
               type:PostalAddress
            type:Organization
      name:Min Max He
      affiliation:
            name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
            address:
               name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
               type:PostalAddress
            type:Organization
      name:Scott Hebbring
      affiliation:
            name:Marshfield Clinic Research Foundation, Center of Human Genetics
            address:
               name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
               type:PostalAddress
            type:Organization
      name:Howard L. Kaufman
      affiliation:
            name:Rush University Cancer Center
            address:
               name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
               type:PostalAddress
            type:Organization
      name:Samir Lababidi
      affiliation:
            name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210
            address:
               name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210, Rockville, USA
               type:PostalAddress
            type:Organization
      name:Lee J. Lancashire
      affiliation:
            name:Thomson Reuters IP & Science
            address:
               name:Thomson Reuters IP & Science, Carlsbad, USA
               type:PostalAddress
            type:Organization
      name:Yan Li
      affiliation:
            name:Rush University Cancer Center
            address:
               name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
               type:PostalAddress
            type:Organization
      name:Xin X. Lu
      affiliation:
            name:AbbVie Inc., Global Pharmaceutical Research and Development
            address:
               name:AbbVie Inc., Global Pharmaceutical Research and Development, North Chicago, USA
               type:PostalAddress
            type:Organization
      name:Heng Luo
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
            name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program
            address:
               name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program, Little Rock, USA
               type:PostalAddress
            type:Organization
      name:Xiwen Ma
      affiliation:
            name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center
            address:
               name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center, Indianapolis, USA
               type:PostalAddress
            type:Organization
      name:Baitang Ning
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Rosa Noguera
      affiliation:
            name:University of Valencia, Medical School
            address:
               name:Department of Pathology, University of Valencia, Medical School, Valencia, Spain
               type:PostalAddress
            type:Organization
      name:Martin Peifer
      affiliation:
            name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
            address:
               name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
               type:PostalAddress
            type:Organization
            name:University of Cologne
            address:
               name:Department of Translational Genomics, University of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:John H. Phan
      affiliation:
            name:GeorgiaTech and Emory University
            address:
               name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
               type:PostalAddress
            type:Organization
      name:Frederik Roels
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
            name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
            address:
               name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Carolina Rosswog
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Susan Shao
      affiliation:
            name:SAS Institute Inc.
            address:
               name:SAS Institute Inc., Cary, USA
               type:PostalAddress
            type:Organization
      name:Jie Shen
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Jessica Theissen
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Gian Paolo Tonini
      affiliation:
            name:University of Padua, Pediatric Research Institute
            address:
               name:Neuroblastoma Laboratory, Onco/Hematology Laboratory, SDB Department, University of Padua, Pediatric Research Institute, Padua, Italy
               type:PostalAddress
            type:Organization
      name:Jo Vandesompele
      affiliation:
            name:Ghent University, Center for Medical Genetics, Ghent University
            address:
               name:Department of Pediatrics and Genetics, Ghent University, Center for Medical Genetics, Ghent University, Ghent, Belgium
               type:PostalAddress
            type:Organization
      name:Po-Yen Wu
      affiliation:
            name:Georgia Institute of Technology, School of Electrical and Computer Engineering
            address:
               name:Georgia Institute of Technology, School of Electrical and Computer Engineering, Atlanta, USA
               type:PostalAddress
            type:Organization
      name:Wenzhong Xiao
      affiliation:
            name:Harvard Medical School, Massachusetts General Hospital
            address:
               name:Harvard Medical School, Massachusetts General Hospital, Boston, USA
               type:PostalAddress
            type:Organization
      name:Joshua Xu
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Weihong Xu
      affiliation:
            name:Stanford University, Stanford Genome Technology Center
            address:
               name:Stanford University, Stanford Genome Technology Center, Palo Alto, USA
               type:PostalAddress
            type:Organization
      name:Jiekun Xuan
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Yong Yang
      affiliation:
            name:Eli Lilly and Company Research Informatics, Lilly Corporate Center
            address:
               name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
               type:PostalAddress
            type:Organization
      name:Zhan Ye
      affiliation:
            name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center
            address:
               name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
               type:PostalAddress
            type:Organization
      name:Zirui Dong
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
      name:Ke K. Zhang
      affiliation:
            name:University of North Dakota School of Medicine
            address:
               name:Department of Pathology, University of North Dakota School of Medicine, Grand Forks, USA
               type:PostalAddress
            type:Organization
      name:Ye Yin
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
      name:Chen Zhao
      affiliation:
            name:Fudan University
            address:
               name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Yuanting Zheng
      affiliation:
            name:Fudan University
            address:
               name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Russell D. Wolfinger
      affiliation:
            name:SAS Institute Inc.
            address:
               name:SAS Institute Inc., Cary, USA
               type:PostalAddress
            type:Organization
      name:Tieliu Shi
      affiliation:
            name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences
            address:
               name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences, Shanghai, China
               type:PostalAddress
            type:Organization
      name:Linda H. Malkas
      affiliation:
            name:Beckman Research Institute, City of Hope Comprehensive Cancer Center
            address:
               name:Department of Molecular & Cellular Biology, Beckman Research Institute, City of Hope Comprehensive Cancer Center, Duarte, USA
               type:PostalAddress
            type:Organization
      name:Frank Berthold
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
            name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
            address:
               name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
               type:PostalAddress
            type:Organization
      name:Jun Wang
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
            name:University of Copenhagen
            address:
               name:Department of Biology, University of Copenhagen, Copenhagen, Denmark
               type:PostalAddress
            type:Organization
            name:King Abdulaziz University
            address:
               name:King Abdulaziz University, Jeddah, Saudi Arabia
               type:PostalAddress
            type:Organization
            name:University of Copenhagen
            address:
               name:Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark
               type:PostalAddress
            type:Organization
      name:Weida Tong
      affiliation:
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      name:Leming Shi
      affiliation:
            name:Fudan University
            address:
               name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
               type:PostalAddress
            type:Organization
            name:National Center for Toxicological Research, U.S. Food and Drug Administration
            address:
               name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
               type:PostalAddress
            type:Organization
      email:[email protected]
      name:Zhiyu Peng
      affiliation:
            name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone
            address:
               name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
               type:PostalAddress
            type:Organization
            name:BGI-Guangzhou, Guangzhou Higher Education Mega Center
            address:
               name:BGI-Guangzhou, Guangzhou Higher Education Mega Center, Guangzhou, China
               type:PostalAddress
            type:Organization
      email:[email protected]
      name:Matthias Fischer
      affiliation:
            name:University Children’s Hospital of Cologne
            address:
               name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
               type:PostalAddress
            type:Organization
            name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty
            address:
               name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
               type:PostalAddress
            type:Organization
      email:[email protected]
PostalAddress:
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
      name:NIH/NCBI, Bethesda, USA
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:NIH/NCBI, Bethesda, USA
      name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
      name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
      name:AbbVie Inc., Global Pharmaceutical R&D, Souderton, USA
      name:GlaxoSmithKline, Discovery Analytics, Collegeville, USA
      name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
      name:SAS Institute Inc., Cary, USA
      name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
      name:Thomson Reuters IP & Science, Carlsbad, USA
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:Center for Genomics and Division of Microbiology & Molecular Genetics, School of Medicine, Loma Linda University, Loma Linda, USA
      name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
      name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
      name:Fondazione Edmund Mach, CRI-CBC, San Michele all’Adige, Italy
      name:Children’s Hospital Los Angeles, Los Angeles, USA
      name:Department of Pediatric Hematology-Oncology, Molecular Oncology, Felsenstein Medical Research Center, Schneider Children’s Medical Center of Israel, Petach Tikva, Israel
      name:SAS Institute Inc., Cary, USA
      name:Thomson Reuters IP & Science, Carlsbad, USA
      name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
      name:Department of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany
      name:Fondazione Bruno Kessler (FBK), Trento Povo, Italy
      name:SAS Institute Inc., Cary, USA
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:University of Nottingham, Children’s Brain Tumour Research Centre, Queen’s Medical Centre, University of Nottingham, Nottingham, UK
      name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
      name:Marshfield Clinic Research Foundation, Center of Human Genetics, Marshfield, USA
      name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
      name:Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, WOC1 RM400S, HFM-210, Rockville, USA
      name:Thomson Reuters IP & Science, Carlsbad, USA
      name:Department of Internal Medicine, Rush University Cancer Center, Chicago, USA
      name:AbbVie Inc., Global Pharmaceutical Research and Development, North Chicago, USA
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:University of Arkansas at Little Rock, UALR/UAMS Joint Bioinformatics Graduate Program, Little Rock, USA
      name:Eli Lilly and Company, Discovery Statistics, Lilly Corporate Center, Indianapolis, USA
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Department of Pathology, University of Valencia, Medical School, Valencia, Spain
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
      name:Department of Translational Genomics, University of Cologne, Cologne, Germany
      name:Department of Biomedical Engineering, GeorgiaTech and Emory University, Atlanta, USA
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:SAS Institute Inc., Cary, USA
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:Neuroblastoma Laboratory, Onco/Hematology Laboratory, SDB Department, University of Padua, Pediatric Research Institute, Padua, Italy
      name:Department of Pediatrics and Genetics, Ghent University, Center for Medical Genetics, Ghent University, Ghent, Belgium
      name:Georgia Institute of Technology, School of Electrical and Computer Engineering, Atlanta, USA
      name:Harvard Medical School, Massachusetts General Hospital, Boston, USA
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Stanford University, Stanford Genome Technology Center, Palo Alto, USA
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Eli Lilly and Company Research Informatics, Lilly Corporate Center, Indianapolis, USA
      name:Marshfield Clinic Research Foundation, Biomedical Informatics Research Center, Marshfield, USA
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:Department of Pathology, University of North Dakota School of Medicine, Grand Forks, USA
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
      name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
      name:SAS Institute Inc., Cary, USA
      name:East China Normal University, Center for Bioinformatics and Computational Biology, Shanghai Key Laboratory of Regulatory Biology, the Institute of Biomedical Sciences and School of Life Sciences, Shanghai, China
      name:Department of Molecular & Cellular Biology, Beckman Research Institute, City of Hope Comprehensive Cancer Center, Duarte, USA
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:Department of Biology, University of Copenhagen, Copenhagen, Denmark
      name:King Abdulaziz University, Jeddah, Saudi Arabia
      name:Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Denmark
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:Collaborative Innovation Center for Genetics and Development, State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences and School of Pharmacy, Fudan University, Shanghai, China
      name:National Center for Toxicological Research, U.S. Food and Drug Administration, Jefferson, USA
      name:BGI-Shenzhen, Main Building, Bei Shan Industrial Zone, Shenzhen, China
      name:BGI-Guangzhou, Guangzhou Higher Education Mega Center, Guangzhou, China
      name:Department of Pediatric Oncology and Hematology, University Children’s Hospital of Cologne, Cologne, Germany
      name:University of Cologne, Center for Molecular Medicine (CMMC), Medical Faculty, Cologne, Germany

External Links {šŸ”—}(304)

Analytics and Tracking {šŸ“Š}

  • Google Tag Manager

Libraries {šŸ“š}

  • Clipboard.js
  • Foundation
  • Prism.js

CDN Services {šŸ“¦}

  • Crossref

4.58s.