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We are analyzing https://link.springer.com/article/10.1007/s10528-023-10528-0.

Title:
Characterization and Molecular Phylogenetic Analysis of Subfamily Erebinae (Lepidoptera: Noctuoidea: Erebidae) Using Five Complete Mitochondrial Genomes | Biochemical Genetics
Description:
In this study, the complete mitogenomes of Sympis rufibasis, Lacera noctilio, Oxyodes scrobiculata, Mocis undata, and Artena dotata were newly sequenced to bring up-to-date the database using the next-generation sequencing methods. The gene order of all sequenced mitogenomes was identical consisting of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a non-coding A+T-rich region, which were common to other Lepidopteran insects. All protein-coding genes (PCGs) initiated with a canonical ATN codon and ended with TAN or an incomplete stop codon, single T. The A+T-rich region of S. rufibasis, L. noctilio, O. scrobiculata, M. undata, and A. dotata are 406 bp, 462 bp, 372 bp, 410 bp, and 406 bp long, respectively, containing number of characteristics that are distinctive to Noctuoidea moths. We analyzed concatenated amino acid sequences of protein-coding genes not including rRNAs, using Maximum Likelihood and Bayesian Inference methods. The phylogenetic analyses indicated that the tribe relationships within Erebinae were reconstructed as (Sypnini+((Erebini 1+Poaphilini 1)+((Euclidiini+Catocalini+(Hypopyrini+Erebini 2))+((Hulodini+(Poaphilini 2+Ophiusini))))). Phylogenetic analyses supported and confirmed the monophyly of the subfamilies’ relationships as follows: (Hypeninae+Lymantriinae)+((Scoliopterginae+((Calpinae+Erebinae)+((Herminiinae+Aganainae)+Arctiinae)))) within Erebidae.
Website Age:
28 years and 1 months (reg. 1997-05-29).

Matching Content Categories {📚}

  • Education
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Content Management System {📝}

What CMS is link.springer.com built with?

Custom-built

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🌠 Phenomenal Traffic: 5M - 10M visitors per month


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How Does Link.springer.com Make Money? {💸}

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Keywords {🔍}

article, mitochondrial, pubmed, google, scholar, cas, lepidoptera, genome, complete, phylogenetic, genomes, analysis, noctuoidea, zhang, central, sun, gene, wang, liu, research, characterization, insects, mol, zhu, relationships, sci, supplementary, data, erebidae, lepidopteran, implications, phylogeny, insect, int, molecular, genes, comparative, res, entomol, httpsdoiorgs, dna, file, information, manuscript, nature, evol, httpsdoiorgjgene, yang, moth, biol,

Topics {✒️}

month download article/chapter bayesian inference methods japanese buff-tip moth maximum likelihood cameron sl full article pdf lymantria dispar reveals privacy choices/manage cookies kuppusamy sivasankaran mitochondrial-encoded genes xin zz complete mitochondrial genome mitochondrial genome phylogeny article shah de bruijn mhl gundersen-rindal de engineering research board entomology research institute rice stem borers wolstenholme dr human mitochondrial genome complete mitochondrion genome ribosomal rna genes mitochondrial genome characterization 13 protein-coding genes protein-coding genes platyhelminth mitochondrial dna holds exclusive rights complete mitochondrial genomes animal mitochondrial dna organellar genome draw insect mitochondrial genomics insect mitochondrial dna animal mitochondrial genomes european economic area +t-rich region canonical atn codon incomplete stop codon cheng xf trna punctuation model fourfold degenerate sites saldamando-benjumea ci villanueva-mejĂ­a df owl athene noctua higher-level classification walnut leaf pest preliminary phylogenetic analysis related phylogenetic analysis molecular phylogenetic analysis conditions privacy policy

Schema {🗺️}

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         headline:Characterization and Molecular Phylogenetic Analysis of Subfamily Erebinae (Lepidoptera: Noctuoidea: Erebidae) Using Five Complete Mitochondrial Genomes
         description:In this study, the complete mitogenomes of Sympis rufibasis, Lacera noctilio, Oxyodes scrobiculata, Mocis undata, and Artena dotata were newly sequenced to bring up-to-date the database using the next-generation sequencing methods. The gene order of all sequenced mitogenomes was identical consisting of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a non-coding A+T-rich region, which were common to other Lepidopteran insects. All protein-coding genes (PCGs) initiated with a canonical ATN codon and ended with TAN or an incomplete stop codon, single T. The A+T-rich region of S. rufibasis, L. noctilio, O. scrobiculata, M. undata, and A. dotata are 406 bp, 462 bp, 372 bp, 410 bp, and 406 bp long, respectively, containing number of characteristics that are distinctive to Noctuoidea moths. We analyzed concatenated amino acid sequences of protein-coding genes not including rRNAs, using Maximum Likelihood and Bayesian Inference methods. The phylogenetic analyses indicated that the tribe relationships within Erebinae were reconstructed as (Sypnini+((Erebini 1+Poaphilini 1)+((Euclidiini+Catocalini+(Hypopyrini+Erebini 2))+((Hulodini+(Poaphilini 2+Ophiusini))))). Phylogenetic analyses supported and confirmed the monophyly of the subfamilies’ relationships as follows: (Hypeninae+Lymantriinae)+((Scoliopterginae+((Calpinae+Erebinae)+((Herminiinae+Aganainae)+Arctiinae)))) within Erebidae.
         datePublished:2023-10-27T00:00:00Z
         dateModified:2023-10-27T00:00:00Z
         pageStart:2224
         pageEnd:2252
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         keywords:
            Bayesian inference
            Erebinae
            Mitogenomes
            Maximum likelihood method
            Phylogenetic implications
            Human Genetics
            Biochemistry
            general
            Zoology
            Medical Microbiology
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                     address:
                        name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
                        type:PostalAddress
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               name:Savarimuthu Ignacimuthu
               url:http://orcid.org/0000-0002-8467-789X
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                     address:
                        name:Xavier Research Foundation, St. Xavier’s College, Palayamkottai, India
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                     address:
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               name:Kuppusamy Sivasankaran
               url:http://orcid.org/0000-0001-8957-231X
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                     name:Entomology Research Institute, Loyola Collège
                     address:
                        name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
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      headline:Characterization and Molecular Phylogenetic Analysis of Subfamily Erebinae (Lepidoptera: Noctuoidea: Erebidae) Using Five Complete Mitochondrial Genomes
      description:In this study, the complete mitogenomes of Sympis rufibasis, Lacera noctilio, Oxyodes scrobiculata, Mocis undata, and Artena dotata were newly sequenced to bring up-to-date the database using the next-generation sequencing methods. The gene order of all sequenced mitogenomes was identical consisting of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and a non-coding A+T-rich region, which were common to other Lepidopteran insects. All protein-coding genes (PCGs) initiated with a canonical ATN codon and ended with TAN or an incomplete stop codon, single T. The A+T-rich region of S. rufibasis, L. noctilio, O. scrobiculata, M. undata, and A. dotata are 406 bp, 462 bp, 372 bp, 410 bp, and 406 bp long, respectively, containing number of characteristics that are distinctive to Noctuoidea moths. We analyzed concatenated amino acid sequences of protein-coding genes not including rRNAs, using Maximum Likelihood and Bayesian Inference methods. The phylogenetic analyses indicated that the tribe relationships within Erebinae were reconstructed as (Sypnini+((Erebini 1+Poaphilini 1)+((Euclidiini+Catocalini+(Hypopyrini+Erebini 2))+((Hulodini+(Poaphilini 2+Ophiusini))))). Phylogenetic analyses supported and confirmed the monophyly of the subfamilies’ relationships as follows: (Hypeninae+Lymantriinae)+((Scoliopterginae+((Calpinae+Erebinae)+((Herminiinae+Aganainae)+Arctiinae)))) within Erebidae.
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      dateModified:2023-10-27T00:00:00Z
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      pageEnd:2252
      sameAs:https://doi.org/10.1007/s10528-023-10528-0
      keywords:
         Bayesian inference
         Erebinae
         Mitogenomes
         Maximum likelihood method
         Phylogenetic implications
         Human Genetics
         Biochemistry
         general
         Zoology
         Medical Microbiology
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            url:http://orcid.org/0000-0003-3026-7083
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                  name:Entomology Research Institute, Loyola Collège
                  address:
                     name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
                     type:PostalAddress
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            name:Muzafar Riyaz
            url:http://orcid.org/0000-0001-9372-681X
            affiliation:
                  name:Entomology Research Institute, Loyola Collège
                  address:
                     name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Savarimuthu Ignacimuthu
            url:http://orcid.org/0000-0002-8467-789X
            affiliation:
                  name:Xavier Research Foundation, St. Xavier’s College
                  address:
                     name:Xavier Research Foundation, St. Xavier’s College, Palayamkottai, India
                     type:PostalAddress
                  type:Organization
                  name:Creighton University
                  address:
                     name:Creighton University, Omaha, USA
                     type:PostalAddress
                  type:Organization
            type:Person
            name:Kuppusamy Sivasankaran
            url:http://orcid.org/0000-0001-8957-231X
            affiliation:
                  name:Entomology Research Institute, Loyola Collège
                  address:
                     name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
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      address:
         name:Xavier Research Foundation, St. Xavier’s College, Palayamkottai, India
         type:PostalAddress
      name:Creighton University
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         name:Creighton University, Omaha, USA
         type:PostalAddress
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      url:http://orcid.org/0000-0003-3026-7083
      affiliation:
            name:Entomology Research Institute, Loyola Collège
            address:
               name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
               type:PostalAddress
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      name:Muzafar Riyaz
      url:http://orcid.org/0000-0001-9372-681X
      affiliation:
            name:Entomology Research Institute, Loyola Collège
            address:
               name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
               type:PostalAddress
            type:Organization
      name:Savarimuthu Ignacimuthu
      url:http://orcid.org/0000-0002-8467-789X
      affiliation:
            name:Xavier Research Foundation, St. Xavier’s College
            address:
               name:Xavier Research Foundation, St. Xavier’s College, Palayamkottai, India
               type:PostalAddress
            type:Organization
            name:Creighton University
            address:
               name:Creighton University, Omaha, USA
               type:PostalAddress
            type:Organization
      name:Kuppusamy Sivasankaran
      url:http://orcid.org/0000-0001-8957-231X
      affiliation:
            name:Entomology Research Institute, Loyola Collège
            address:
               name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
               type:PostalAddress
            type:Organization
      email:[email protected]
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      name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
      name:Xavier Research Foundation, St. Xavier’s College, Palayamkottai, India
      name:Creighton University, Omaha, USA
      name:Division of Taxonomy and Biodiversity, Entomology Research Institute, Loyola Collège, Chennai, India
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