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We are analyzing https://eurjmedres.biomedcentral.com/articles/10.1186/s40001-025-02411-y.

Title:
SLC7A11, a disulfidptosis-related gene, correlates with multi-omics prognostic analysis in hepatocellular carcinoma | European Journal of Medical Research | Full Text
Description:
Background This study sought to establish a risk score signature based on disulfidptosis-related genes (DRGs) to predict the prognosis of hepatocellular carcinoma (HCC) patients. Methods The expression data of DRGs from the Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium (ICGC) was analyzed to develop and validate a DRG prognostic signature (DRGPS). In vitro, experiments were conducted to explore DRG expressions and roles in HCC tissues and cell lines. HCC tissue microarrays were employed to analyze SLC7A11 expression and its association with clinicopathological characteristics. Results The DRGPS consisted of 5 DRGs (SLC7A11, MATN3, CLEC3B, CCNJL, and PON1). The survival rate of HCC patients in high-risk group was significantly lower than that in low-risk group. The DRGPS was also associated with the modulation of tumor microenvironment (TME), tumor mutation burden (TMB), stemness and chemosensitivity. Furthermore, pan-cancer analysis suggested that the DRGPS risk score was associated with immune infiltration and stemness in multiple cancers. Moreover, our DRGPS had potential for predicting treatment efficacy in HCC patients. Finally, we confirmed that downregulation of SLC7A11, a DRG, inhibited the proliferation and migration of HCC cells, while its high expression correlated with advanced TNM clinical stage and larger tumor size. Conclusions This study systematically describes a novel DRGPS constructed for predicting HCC prognosis, providing a new approach to risk stratification and treatment options. It also investigates the expression and function of SLC7A11, contributing to further exploration of the molecular mechanism underlying disulfidptosis in HCC, as well as its prognostic and therapeutic implications. Graphical Abstract
Website Age:
25 years and 10 months (reg. 1999-08-06).

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Keywords {🔍}

hcc, risk, analysis, pubmed, article, patients, cells, drgps, fig, google, scholar, carcinoma, hepatocellular, cancer, cell, score, tumor, immune, drgs, survival, cas, expression, slca, group, genes, high, central, gene, prognostic, lowrisk, clinical, prognosis, wang, drg, clusters, scores, correlation, groups, based, tmb, stemness, study, signature, highrisk, treatment, disulfidptosis, data, conducted, proliferation, results,

Topics {✒️}

hes1/pten/akt/mtor signaling pathway immunomodulatory tgf-β signaling springer nature additional information publisher' half-maximum inhibitory concentrations received anti-tumor treatment pi3k/akt/mtor pathway il-1β-induced elevation limited single-agent activity sybr-green master mix reverse transcription kit wilcoxon signed-rank test tumor mutation burden �α-linolenic acid metabolism” α-amino acid metabolism potent anti-tumor immunity nonsynonymous mutations/exon length tumor mutational burden org/projects/liri-jp state privacy rights low-risk group exhibited tcga–lihc data set emt-related gene signature driving tumor-infiltrating macrophage kaplan–meier curves predicted article/ supplementary material materials prospective real-world data data availability sharing multi-omics prognostic analysis icgc–liri–jp cohort kaplan–meier analysis showed kaplan–meier survival curves central south university central south university fda-approved proteasome inhibitor kaplan–meier survival analysis immune editing induced cancer genome atlas prognostic target-gene signature privacy choices/manage cookies pan-cancer stemness analysis abbreviations hcc discussion due heterogeneous nature single-cell analysis medical ethics committee bmc mutation patterns differed

Questions {❓}

  • The landscape of alpha fetoprotein in hepatocellular carcinoma: where are we?

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         description:This study sought to establish a risk score signature based on disulfidptosis-related genes (DRGs) to predict the prognosis of hepatocellular carcinoma (HCC) patients. The expression data of DRGs from the Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium (ICGC) was analyzed to develop and validate a DRG prognostic signature (DRGPS). In vitro, experiments were conducted to explore DRG expressions and roles in HCC tissues and cell lines. HCC tissue microarrays were employed to analyze SLC7A11 expression and its association with clinicopathological characteristics. The DRGPS consisted of 5 DRGs (SLC7A11, MATN3, CLEC3B, CCNJL, and PON1). The survival rate of HCC patients in high-risk group was significantly lower than that in low-risk group. The DRGPS was also associated with the modulation of tumor microenvironment (TME), tumor mutation burden (TMB), stemness and chemosensitivity. Furthermore, pan-cancer analysis suggested that the DRGPS risk score was associated with immune infiltration and stemness in multiple cancers. Moreover, our DRGPS had potential for predicting treatment efficacy in HCC patients. Finally, we confirmed that downregulation of SLC7A11, a DRG, inhibited the proliferation and migration of HCC cells, while its high expression correlated with advanced TNM clinical stage and larger tumor size. This study systematically describes a novel DRGPS constructed for predicting HCC prognosis, providing a new approach to risk stratification and treatment options. It also investigates the expression and function of SLC7A11, contributing to further exploration of the molecular mechanism underlying disulfidptosis in HCC, as well as its prognostic and therapeutic implications.
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      headline:SLC7A11, a disulfidptosis-related gene, correlates with multi-omics prognostic analysis in hepatocellular carcinoma
      description:This study sought to establish a risk score signature based on disulfidptosis-related genes (DRGs) to predict the prognosis of hepatocellular carcinoma (HCC) patients. The expression data of DRGs from the Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium (ICGC) was analyzed to develop and validate a DRG prognostic signature (DRGPS). In vitro, experiments were conducted to explore DRG expressions and roles in HCC tissues and cell lines. HCC tissue microarrays were employed to analyze SLC7A11 expression and its association with clinicopathological characteristics. The DRGPS consisted of 5 DRGs (SLC7A11, MATN3, CLEC3B, CCNJL, and PON1). The survival rate of HCC patients in high-risk group was significantly lower than that in low-risk group. The DRGPS was also associated with the modulation of tumor microenvironment (TME), tumor mutation burden (TMB), stemness and chemosensitivity. Furthermore, pan-cancer analysis suggested that the DRGPS risk score was associated with immune infiltration and stemness in multiple cancers. Moreover, our DRGPS had potential for predicting treatment efficacy in HCC patients. Finally, we confirmed that downregulation of SLC7A11, a DRG, inhibited the proliferation and migration of HCC cells, while its high expression correlated with advanced TNM clinical stage and larger tumor size. This study systematically describes a novel DRGPS constructed for predicting HCC prognosis, providing a new approach to risk stratification and treatment options. It also investigates the expression and function of SLC7A11, contributing to further exploration of the molecular mechanism underlying disulfidptosis in HCC, as well as its prognostic and therapeutic implications.
      datePublished:2025-03-12T00:00:00Z
      dateModified:2025-03-12T00:00:00Z
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      name:Department of Gastroenterology, Xiangya Hospital, Central South University, Changsha, China
      name:National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Changsha, China
      name:Department of Gastroenterology, Xiangya Hospital, Central South University, Changsha, China
      name:National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Changsha, China
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